Mapping the Structure-Function Relationships of Disordered Oncogenic Transcription Factors Using Transcriptomic Analysis

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Cité par 30

09:58 min

27 juin 2020

10.3791/61564-v

27 juin 2020

406 vues
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Intrinsically disordered domains are important for oncogenic fusion transcription factor function. To therapeutically target these proteins, a more detailed understanding of the regulatory mechanisms employed by these domains is required. Here, we use transcriptomics to map important structural features of the intrinsically disordered EWS domain in Ewing sarcoma.

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Intrinsically Disordered Domain

Chapters in this video

0:04

Introduction

0:55

In Vitro Construct Panel Setup

2:07

Cell Collection

2:47

Construct Expression Validation and Correlative Phenotypic Assay Setup

3:50

Alignment and Transcript Counting Pipeline

5:32

Differential Expression

7:40

Results: Representative Disordered Oncogenic Transcription Factor Structure-Function Relationship Mapping

9:31

Conclusion

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